{"uniprot":"P12074","gene":"COX6A1","title":"COX6A1 (Cytochrome c Oxidase Subunit 6a1, Mitochondrial)","length":109,"sequence":["MAVVGVSSVSRLLGRSRPQLGRPMSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHERPEFIAYPHLRIRTKPFPWGDGNHTLFHNPHVNPLPTGYEDE"],"topology":[{"pos":1,"topology":"tp"},{"pos":2,"topology":"tp"},{"pos":3,"topology":"tp"},{"pos":4,"topology":"tp"},{"pos":5,"topology":"tp"},{"pos":6,"topology":"tp"},{"pos":7,"topology":"tp"},{"pos":8,"topology":"tp"},{"pos":9,"topology":"tp"},{"pos":10,"topology":"tp"},{"pos":11,"topology":"tp"},{"pos":12,"topology":"tp"},{"pos":13,"topology":"tp"},{"pos":14,"topology":"tp"},{"pos":15,"topology":"tp"},{"pos":16,"topology":"tp"},{"pos":17,"topology":"tp"},{"pos":18,"topology":"tp"},{"pos":19,"topology":"tp"},{"pos":20,"topology":"tp"},{"pos":21,"topology":"tp"},{"pos":22,"topology":"tp"},{"pos":23,"topology":"tp"},{"pos":24,"topology":"tp"},{"pos":25,"topology":"outside"},{"pos":26,"topology":"outside"},{"pos":27,"topology":"outside"},{"pos":28,"topology":"outside"},{"pos":29,"topology":"outside"},{"pos":30,"topology":"outside"},{"pos":31,"topology":"outside"},{"pos":32,"topology":"outside"},{"pos":33,"topology":"outside"},{"pos":34,"topology":"outside"},{"pos":35,"topology":"membr"},{"pos":36,"topology":"membr"},{"pos":37,"topology":"membr"},{"pos":38,"topology":"membr"},{"pos":39,"topology":"membr"},{"pos":40,"topology":"membr"},{"pos":41,"topology":"membr"},{"pos":42,"topology":"membr"},{"pos":43,"topology":"membr"},{"pos":44,"topology":"membr"},{"pos":45,"topology":"membr"},{"pos":46,"topology":"membr"},{"pos":47,"topology":"membr"},{"pos":48,"topology":"membr"},{"pos":49,"topology":"membr"},{"pos":50,"topology":"membr"},{"pos":51,"topology":"membr"},{"pos":52,"topology":"membr"},{"pos":53,"topology":"membr"},{"pos":54,"topology":"membr"},{"pos":55,"topology":"membr"},{"pos":56,"topology":"membr"},{"pos":57,"topology":"membr"},{"pos":58,"topology":"membr"},{"pos":59,"topology":"membr"},{"pos":60,"topology":"inside"},{"pos":61,"topology":"inside"},{"pos":62,"topology":"inside"},{"pos":63,"topology":"inside"},{"pos":64,"topology":"inside"},{"pos":65,"topology":"inside"},{"pos":66,"topology":"inside"},{"pos":67,"topology":"inside"},{"pos":68,"topology":"inside"},{"pos":69,"topology":"inside"},{"pos":70,"topology":"inside"},{"pos":71,"topology":"inside"},{"pos":72,"topology":"inside"},{"pos":73,"topology":"inside"},{"pos":74,"topology":"inside"},{"pos":75,"topology":"inside"},{"pos":76,"topology":"inside"},{"pos":77,"topology":"inside"},{"pos":78,"topology":"inside"},{"pos":79,"topology":"inside"},{"pos":80,"topology":"inside"},{"pos":81,"topology":"inside"},{"pos":82,"topology":"inside"},{"pos":83,"topology":"inside"},{"pos":84,"topology":"inside"},{"pos":85,"topology":"inside"},{"pos":86,"topology":"inside"},{"pos":87,"topology":"inside"},{"pos":88,"topology":"inside"},{"pos":89,"topology":"inside"},{"pos":90,"topology":"inside"},{"pos":91,"topology":"inside"},{"pos":92,"topology":"inside"},{"pos":93,"topology":"inside"},{"pos":94,"topology":"inside"},{"pos":95,"topology":"inside"},{"pos":96,"topology":"inside"},{"pos":97,"topology":"inside"},{"pos":98,"topology":"inside"},{"pos":99,"topology":"inside"},{"pos":100,"topology":"inside"},{"pos":101,"topology":"inside"},{"pos":102,"topology":"inside"},{"pos":103,"topology":"inside"},{"pos":104,"topology":"inside"},{"pos":105,"topology":"inside"},{"pos":106,"topology":"inside"},{"pos":107,"topology":"inside"},{"pos":108,"topology":"inside"},{"pos":109,"topology":"inside"}],"curves":{"stringent":[{"pos":1,"prob":0.594398},{"pos":2,"prob":0.716599},{"pos":3,"prob":0.716858},{"pos":4,"prob":0.655628},{"pos":5,"prob":0.594398},{"pos":6,"prob":0.524271},{"pos":7,"prob":0.454144},{"pos":8,"prob":0.461733},{"pos":9,"prob":0.454144},{"pos":10,"prob":0.432684},{"pos":11,"prob":0.454144},{"pos":12,"prob":0.461733},{"pos":13,"prob":0.469322},{"pos":14,"prob":0.53186},{"pos":15,"prob":0.594398},{"pos":16,"prob":0.716858},{"pos":17,"prob":0.716858},{"pos":18,"prob":0.9213},{"pos":19,"prob":0.93582},{"pos":20,"prob":0.977962},{"pos":21,"prob":0.977962},{"pos":22,"prob":0.977962},{"pos":23,"prob":0.977962},{"pos":24,"prob":0.977962},{"pos":25,"prob":0.977962},{"pos":26,"prob":0.977962},{"pos":27,"prob":0.93582},{"pos":28,"prob":0.828633},{"pos":29,"prob":0.702783},{"pos":30,"prob":0.620286},{"pos":31,"prob":0.271063},{"pos":32,"prob":0.119871},{"pos":33,"prob":0.119871},{"pos":34,"prob":0.119871},{"pos":35,"prob":0.119871},{"pos":36,"prob":0.119871},{"pos":37,"prob":0.119871},{"pos":38,"prob":0.119871},{"pos":39,"prob":0.169453},{"pos":40,"prob":0.184943},{"pos":41,"prob":0.26545},{"pos":42,"prob":0.271063},{"pos":43,"prob":0.306399},{"pos":44,"prob":0.403915},{"pos":45,"prob":0.505975},{"pos":46,"prob":0.505975},{"pos":47,"prob":0.505975},{"pos":48,"prob":0.505975},{"pos":49,"prob":0.505975},{"pos":50,"prob":0.630438},{"pos":51,"prob":0.778008},{"pos":52,"prob":0.938354},{"pos":53,"prob":0.940629},{"pos":54,"prob":0.940629},{"pos":55,"prob":0.845945},{"pos":56,"prob":0.630438},{"pos":57,"prob":0.505975},{"pos":58,"prob":0.443234},{"pos":59,"prob":0.22968},{"pos":60,"prob":0.141553},{"pos":61,"prob":0.141553},{"pos":62,"prob":0.141553},{"pos":63,"prob":0.162255},{"pos":64,"prob":0.07377},{"pos":65,"prob":0.070149},{"pos":66,"prob":0.024966},{"pos":67,"prob":0.024966},{"pos":68,"prob":0.022978},{"pos":69,"prob":0.022978},{"pos":70,"prob":0.022978},{"pos":71,"prob":0.022978},{"pos":72,"prob":0.022978},{"pos":73,"prob":0.022779},{"pos":74,"prob":0.022417},{"pos":75,"prob":0.022417},{"pos":76,"prob":0.022417},{"pos":77,"prob":0.022417},{"pos":78,"prob":0.008554},{"pos":79,"prob":0.007923},{"pos":80,"prob":0.001407},{"pos":81,"prob":0.000071},{"pos":82,"prob":0.000049},{"pos":83,"prob":0.000049},{"pos":84,"prob":0.000044},{"pos":85,"prob":0.000044},{"pos":86,"prob":0.000044},{"pos":87,"prob":0.000044},{"pos":88,"prob":0.000044},{"pos":89,"prob":0.000044},{"pos":90,"prob":0.000049},{"pos":91,"prob":0.000065},{"pos":92,"prob":0.000071},{"pos":93,"prob":0.000102},{"pos":94,"prob":0.001303},{"pos":95,"prob":0.027836},{"pos":96,"prob":0.034003},{"pos":97,"prob":0.04017},{"pos":98,"prob":0.231923},{"pos":99,"prob":0.423676},{"pos":100,"prob":0.4395},{"pos":101,"prob":0.455324},{"pos":102,"prob":0.503419},{"pos":103,"prob":0.551515},{"pos":104,"prob":0.748567},{"pos":105,"prob":0.94562},{"pos":106,"prob":0.964131},{"pos":107,"prob":0.982642},{"pos":108,"prob":0.964131},{"pos":109,"prob":0.94562}],"moderate":[{"pos":1,"prob":0.594398},{"pos":2,"prob":0.716599},{"pos":3,"prob":0.716858},{"pos":4,"prob":0.655628},{"pos":5,"prob":0.594398},{"pos":6,"prob":0.524271},{"pos":7,"prob":0.454144},{"pos":8,"prob":0.461733},{"pos":9,"prob":0.454144},{"pos":10,"prob":0.432684},{"pos":11,"prob":0.454144},{"pos":12,"prob":0.461733},{"pos":13,"prob":0.469322},{"pos":14,"prob":0.53186},{"pos":15,"prob":0.594398},{"pos":16,"prob":0.716858},{"pos":17,"prob":0.716858},{"pos":18,"prob":0.9213},{"pos":19,"prob":0.93582},{"pos":20,"prob":0.977962},{"pos":21,"prob":0.977962},{"pos":22,"prob":0.977962},{"pos":23,"prob":0.977962},{"pos":24,"prob":0.977962},{"pos":25,"prob":0.977962},{"pos":26,"prob":0.977962},{"pos":27,"prob":0.93582},{"pos":28,"prob":0.828633},{"pos":29,"prob":0.702783},{"pos":30,"prob":0.620286},{"pos":31,"prob":0.271063},{"pos":32,"prob":0.119871},{"pos":33,"prob":0.119871},{"pos":34,"prob":0.119871},{"pos":35,"prob":0.119871},{"pos":36,"prob":0.119871},{"pos":37,"prob":0.119871},{"pos":38,"prob":0.119871},{"pos":39,"prob":0.169453},{"pos":40,"prob":0.184943},{"pos":41,"prob":0.26545},{"pos":42,"prob":0.271063},{"pos":43,"prob":0.306399},{"pos":44,"prob":0.403915},{"pos":45,"prob":0.505975},{"pos":46,"prob":0.505975},{"pos":47,"prob":0.505975},{"pos":48,"prob":0.505975},{"pos":49,"prob":0.505975},{"pos":50,"prob":0.630438},{"pos":51,"prob":0.778008},{"pos":52,"prob":0.938354},{"pos":53,"prob":0.940629},{"pos":54,"prob":0.940629},{"pos":55,"prob":0.845945},{"pos":56,"prob":0.630438},{"pos":57,"prob":0.505975},{"pos":58,"prob":0.443234},{"pos":59,"prob":0.22968},{"pos":60,"prob":0.141553},{"pos":61,"prob":0.141553},{"pos":62,"prob":0.141553},{"pos":63,"prob":0.162255},{"pos":64,"prob":0.07377},{"pos":65,"prob":0.070149},{"pos":66,"prob":0.024966},{"pos":67,"prob":0.024966},{"pos":68,"prob":0.022978},{"pos":69,"prob":0.022978},{"pos":70,"prob":0.022978},{"pos":71,"prob":0.022978},{"pos":72,"prob":0.022978},{"pos":73,"prob":0.022779},{"pos":74,"prob":0.022417},{"pos":75,"prob":0.022417},{"pos":76,"prob":0.022417},{"pos":77,"prob":0.022417},{"pos":78,"prob":0.008554},{"pos":79,"prob":0.007923},{"pos":80,"prob":0.001407},{"pos":81,"prob":0.000071},{"pos":82,"prob":0.000049},{"pos":83,"prob":0.000049},{"pos":84,"prob":0.000044},{"pos":85,"prob":0.000044},{"pos":86,"prob":0.000044},{"pos":87,"prob":0.000044},{"pos":88,"prob":0.000044},{"pos":89,"prob":0.000044},{"pos":90,"prob":0.000049},{"pos":91,"prob":0.000065},{"pos":92,"prob":0.000071},{"pos":93,"prob":0.000102},{"pos":94,"prob":0.001303},{"pos":95,"prob":0.027836},{"pos":96,"prob":0.034003},{"pos":97,"prob":0.04017},{"pos":98,"prob":0.231923},{"pos":99,"prob":0.423676},{"pos":100,"prob":0.4395},{"pos":101,"prob":0.455324},{"pos":102,"prob":0.503419},{"pos":103,"prob":0.551515},{"pos":104,"prob":0.748567},{"pos":105,"prob":0.94562},{"pos":106,"prob":0.964131},{"pos":107,"prob":0.982642},{"pos":108,"prob":0.964131},{"pos":109,"prob":0.94562}],"permissive":[{"pos":1,"prob":0.594398},{"pos":2,"prob":0.716599},{"pos":3,"prob":0.716858},{"pos":4,"prob":0.655628},{"pos":5,"prob":0.594398},{"pos":6,"prob":0.524271},{"pos":7,"prob":0.454144},{"pos":8,"prob":0.461733},{"pos":9,"prob":0.454144},{"pos":10,"prob":0.432684},{"pos":11,"prob":0.454144},{"pos":12,"prob":0.461733},{"pos":13,"prob":0.469322},{"pos":14,"prob":0.53186},{"pos":15,"prob":0.594398},{"pos":16,"prob":0.716858},{"pos":17,"prob":0.716858},{"pos":18,"prob":0.9213},{"pos":19,"prob":0.93582},{"pos":20,"prob":0.977962},{"pos":21,"prob":0.977962},{"pos":22,"prob":0.977962},{"pos":23,"prob":0.977962},{"pos":24,"prob":0.977962},{"pos":25,"prob":0.977962},{"pos":26,"prob":0.977962},{"pos":27,"prob":0.93582},{"pos":28,"prob":0.828633},{"pos":29,"prob":0.702783},{"pos":30,"prob":0.620286},{"pos":31,"prob":0.271063},{"pos":32,"prob":0.119871},{"pos":33,"prob":0.119871},{"pos":34,"prob":0.119871},{"pos":35,"prob":0.119871},{"pos":36,"prob":0.119871},{"pos":37,"prob":0.119871},{"pos":38,"prob":0.119871},{"pos":39,"prob":0.169453},{"pos":40,"prob":0.184943},{"pos":41,"prob":0.26545},{"pos":42,"prob":0.271063},{"pos":43,"prob":0.306399},{"pos":44,"prob":0.403915},{"pos":45,"prob":0.505975},{"pos":46,"prob":0.505975},{"pos":47,"prob":0.505975},{"pos":48,"prob":0.505975},{"pos":49,"prob":0.505975},{"pos":50,"prob":0.630438},{"pos":51,"prob":0.778008},{"pos":52,"prob":0.938354},{"pos":53,"prob":0.940629},{"pos":54,"prob":0.940629},{"pos":55,"prob":0.845945},{"pos":56,"prob":0.630438},{"pos":57,"prob":0.505975},{"pos":58,"prob":0.443234},{"pos":59,"prob":0.22968},{"pos":60,"prob":0.141553},{"pos":61,"prob":0.141553},{"pos":62,"prob":0.141553},{"pos":63,"prob":0.162255},{"pos":64,"prob":0.07377},{"pos":65,"prob":0.070149},{"pos":66,"prob":0.024966},{"pos":67,"prob":0.024966},{"pos":68,"prob":0.022978},{"pos":69,"prob":0.022978},{"pos":70,"prob":0.022978},{"pos":71,"prob":0.022978},{"pos":72,"prob":0.022978},{"pos":73,"prob":0.022779},{"pos":74,"prob":0.022417},{"pos":75,"prob":0.022417},{"pos":76,"prob":0.022417},{"pos":77,"prob":0.022417},{"pos":78,"prob":0.008554},{"pos":79,"prob":0.007923},{"pos":80,"prob":0.001407},{"pos":81,"prob":0.000071},{"pos":82,"prob":0.000049},{"pos":83,"prob":0.000049},{"pos":84,"prob":0.000044},{"pos":85,"prob":0.000044},{"pos":86,"prob":0.000044},{"pos":87,"prob":0.000044},{"pos":88,"prob":0.000044},{"pos":89,"prob":0.000044},{"pos":90,"prob":0.000049},{"pos":91,"prob":0.000065},{"pos":92,"prob":0.000071},{"pos":93,"prob":0.000102},{"pos":94,"prob":0.001303},{"pos":95,"prob":0.027836},{"pos":96,"prob":0.034003},{"pos":97,"prob":0.04017},{"pos":98,"prob":0.231923},{"pos":99,"prob":0.423676},{"pos":100,"prob":0.4395},{"pos":101,"prob":0.455324},{"pos":102,"prob":0.503419},{"pos":103,"prob":0.551515},{"pos":104,"prob":0.748567},{"pos":105,"prob":0.94562},{"pos":106,"prob":0.964131},{"pos":107,"prob":0.982642},{"pos":108,"prob":0.964131},{"pos":109,"prob":0.94562}]},"peaks":{"stringent":[{"peak_position":4,"peak_height":0.597275,"prominence":0.136836,"width":4.100126,"left_ip":1.259604,"right_ip":5.35973,"left_ip_0.9":0.680104,"right_ip_0.9":7.362209,"left_ip_0.75":0.858295,"right_ip_0.75":6.431054,"left_ip_1.0":0.56131,"right_ip_1.0":9,"octamer":"MAVV|GVSS"},{"peak_position":23,"peak_height":0.97235,"prominence":0.576567,"width":12.912708,"left_ip":14.832528,"right_ip":27.745236,"left_ip_0.9":0.500545,"right_ip_0.9":29.500302,"left_ip_0.75":12.478953,"right_ip_0.75":28.85535,"left_ip_1.0":0,"right_ip_1.0":29.930252,"octamer":"LGRP|MSSG"},{"peak_position":53,"peak_height":0.834126,"prominence":0.704841,"width":11.330406,"left_ip":45.102561,"right_ip":56.432967,"left_ip_0.9":38.694815,"right_ip_0.9":59.687068,"left_ip_0.75":41.235099,"right_ip_0.75":58.13253,"left_ip_1.0":-2.313593,"right_ip_1.0":61.6275,"octamer":"VAVS|MLNV"},{"peak_position":106,"peak_height":0.854688,"prominence":0.281448,"width":4.351869,"left_ip":102.783723,"right_ip":107.135592,"left_ip_0.9":101.542016,"right_ip_0.9":107.827118,"left_ip_0.75":102.023235,"right_ip_0.75":107.567796,"left_ip_1.0":101.220312,"right_ip_1.0":108,"octamer":"PTGY|EDE"}],"moderate":[{"peak_position":4,"peak_height":0.597275,"prominence":0.136836,"width":4.100126,"left_ip":1.259604,"right_ip":5.35973,"left_ip_0.9":0.680104,"right_ip_0.9":7.362209,"left_ip_0.75":0.858295,"right_ip_0.75":6.431054,"left_ip_1.0":0.56131,"right_ip_1.0":9,"octamer":"MAVV|GVSS"},{"peak_position":23,"peak_height":0.97235,"prominence":0.576567,"width":12.912708,"left_ip":14.832528,"right_ip":27.745236,"left_ip_0.9":0.500545,"right_ip_0.9":29.500302,"left_ip_0.75":12.478953,"right_ip_0.75":28.85535,"left_ip_1.0":0,"right_ip_1.0":29.930252,"octamer":"LGRP|MSSG"},{"peak_position":53,"peak_height":0.834126,"prominence":0.704841,"width":11.330406,"left_ip":45.102561,"right_ip":56.432967,"left_ip_0.9":38.694815,"right_ip_0.9":59.687068,"left_ip_0.75":41.235099,"right_ip_0.75":58.13253,"left_ip_1.0":-2.313593,"right_ip_1.0":61.6275,"octamer":"VAVS|MLNV"},{"peak_position":106,"peak_height":0.854688,"prominence":0.281448,"width":4.351869,"left_ip":102.783723,"right_ip":107.135592,"left_ip_0.9":101.542016,"right_ip_0.9":107.827118,"left_ip_0.75":102.023235,"right_ip_0.75":107.567796,"left_ip_1.0":101.220312,"right_ip_1.0":108,"octamer":"PTGY|EDE"}],"permissive":[{"peak_position":4,"peak_height":0.597275,"prominence":0.136836,"width":4.100126,"left_ip":1.259604,"right_ip":5.35973,"left_ip_0.9":0.680104,"right_ip_0.9":7.362209,"left_ip_0.75":0.858295,"right_ip_0.75":6.431054,"left_ip_1.0":0.56131,"right_ip_1.0":9,"octamer":"MAVV|GVSS"},{"peak_position":23,"peak_height":0.97235,"prominence":0.576567,"width":12.912708,"left_ip":14.832528,"right_ip":27.745236,"left_ip_0.9":0.500545,"right_ip_0.9":29.500302,"left_ip_0.75":12.478953,"right_ip_0.75":28.85535,"left_ip_1.0":0,"right_ip_1.0":29.930252,"octamer":"LGRP|MSSG"},{"peak_position":53,"peak_height":0.834126,"prominence":0.704841,"width":11.330406,"left_ip":45.102561,"right_ip":56.432967,"left_ip_0.9":38.694815,"right_ip_0.9":59.687068,"left_ip_0.75":41.235099,"right_ip_0.75":58.13253,"left_ip_1.0":-2.313593,"right_ip_1.0":61.6275,"octamer":"VAVS|MLNV"},{"peak_position":106,"peak_height":0.854688,"prominence":0.281448,"width":4.351869,"left_ip":102.783723,"right_ip":107.135592,"left_ip_0.9":101.542016,"right_ip_0.9":107.827118,"left_ip_0.75":102.023235,"right_ip_0.75":107.567796,"left_ip_1.0":101.220312,"right_ip_1.0":108,"octamer":"PTGY|EDE"}]},"domains":{"gene3d":[{"start":25,"end":109,"name":"Cytochrome c oxidase, subunit VIa superfamily"}],"superfamily":[{"start":25,"end":108,"name":"Cytochrome c oxidase, subunit VIa superfamily"}]},"cleavages":[{"pos":23,"pos_p1":22,"source":"topfind","citation":"Crawford_2013_MolCellProteomics","pmid":"23264352","doi":"","protease":"","protease_uniprot":"","uniprot_feature_type":"","uniprot_description":"","merops_protease_code":"","merops_cleavage_type":"","merops_method":"","topfind_method":"Subtiligase","weeks_method":"","schaeffer_cell_types":""},{"pos":24,"pos_p1":23,"source":"topfind","citation":"Crawford_2013_MolCellProteomics","pmid":"23264352","doi":"","protease":"","protease_uniprot":"","uniprot_feature_type":"","uniprot_description":"","merops_protease_code":"","merops_cleavage_type":"","merops_method":"","topfind_method":"Subtiligase","weeks_method":"","schaeffer_cell_types":""},{"pos":24,"pos_p1":24,"source":"uniprot","citation":"Hochstrasser_1992_Electrophoresis","pmid":"1286669","doi":"","protease":"","protease_uniprot":"","uniprot_feature_type":"transit_peptide","uniprot_description":"Mitochondrion","merops_protease_code":"","merops_cleavage_type":"","merops_method":"","topfind_method":"","weeks_method":"","schaeffer_cell_types":""}]}
